If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 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'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 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'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 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'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 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'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 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'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 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'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ), 'gf_id' => 'HOM05D000551', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000551' ), 'data_identifier' => 'HOM05D000551', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000551', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39450' => 'bna', 'A02p23830' => 'bna', 'A03p21470' => 'bna', 'A03p21480' => 'bna', 'A03p38720' => 'bna', 'A03p39470' => 'bna', 'A04p29470' => 'bna', 'A05p07460' => 'bna', 'A05p33590' => 'bna', 'A06p00720' => 'bna', 'A06p00730' => 'bna', 'A07p45400' => 'bna', 'A09p15510' => 'bna', 'Aa31LG2G730' => 'aar', 'Aa31LG4G400' => 'aar', 'Aa31LG5G23290' => 'aar', 'Aa31LG8G1530' => 'aar', 'Aa31LG8G3010' => 'aar', 'Aa31LG9G470' => 'aar', 'Actinidia01747' => 'ach', 'Actinidia02019' => 'ach', 'Actinidia10611' => 'ach', 'Actinidia14549' => 'ach', 'Actinidia15764' => 'ach', 'Actinidia15767' => 'ach', 'Actinidia20809' => 'ach', 'Actinidia20810' => 'ach', 'Actinidia28340' => 'ach', 'Actinidia31149' => 'ach', 'Actinidia32579' => 'ach', 'Actinidia32580' => 'ach', 'Ah.01g020650' => 'amhyb', 'Ah.08g217330' => 'amhyb', 'Ah.12g052030' => 'amhyb', 'Ah.12g057210' => 'amhyb', 'Ah.12g057220' => 'amhyb', 'Ah.15g094990' => 'amhyb', 'AL1G62580' => 'aly', 'AL2G11820' => 'aly', 'AL2G41410' => 'aly', 'AL3G26560' => 'aly', 'AL3G26570' => 'aly', 'AL3G28470' => 'aly', 'AL4G35910' => 'aly', 'AL7G47810' => 'aly', 'Aqoxy2G00657' => 'aox', 'Aqoxy2G00659' => 'aox', 'Aqoxy7G02279' => 'aox', 'Aqoxy7G04173' => 'aox', 'Aqoxy7G04175' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0WPF7D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2JF5GX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4IR4JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5E2H6P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6486U1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BHHB36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BLVN7J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G529J0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HN33BR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLL633' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MYB15F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N41DPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N47CAS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R3N6QG' => 'arhy', 'AT1G53870' => 'ath', 'AT1G53875' => 'ath', 'AT1G53890' => 'ath', 'AT1G63410' => 'ath', 'AT1G80120' => 'ath', 'AT2G38640' => 'ath', 'AT3G14260' => 'ath', 'AT3G15810' => 'ath', 'AT5G41590' => 'ath', 'ATR0099G022' => 'atr', 'ATR0721G008' => 'atr', 'ATR0743G024' => 'atr', 'ATR0796G007' => 'atr', 'ATR1127G106' => 'atr', 'ATR1127G176' => 'atr', 'Atru.chr1.2974' => 'acertr', 'Atru.chr8.25' => 'acertr', 'Atru.chr8.29' => 'acertr', 'Atru.chr9.2104' => 'acertr', 'Atru.chr9.2208' => 'acertr', 'Atru.chr9.2209' => 'acertr', 'Atru.chr9.2210' => 'acertr', 'Atru.chr9.2212' => 'acertr', 'AUR62001412' => 'cqu', 'AUR62010612' => 'cqu', 'AUR62010762' => 'cqu', 'AUR62011158' => 'cqu', 'AUR62011159' => 'cqu', 'AUR62011523' => 'cqu', 'AUR62013329' => 'cqu', 'AUR62013330' => 'cqu', 'AUR62016341' => 'cqu', 'AUR62017257' => 'cqu', 'AUR62019763' => 'cqu', 'AUR62025621' => 'cqu', 'BcaB01g03670' => 'bca', 'BcaB02g08700' => 'bca', 'BcaB02g09187' => 'bca', 'BcaB02g10880' => 'bca', 'BcaB04g18829' => 'bca', 'BcaB04g18830' => 'bca', 'BcaB05g25298' => 'bca', 'BcaB06g25689' => 'bca', 'BcaB06g27631' => 'bca', 'BcaB06g27633' => 'bca', 'BcaB06g27634' => 'bca', 'BcaB07g31400' => 'bca', 'BcaB07g33284' => 'bca', 'BcaC01g03856' => 'bca', 'BcaC01g03941' => 'bca', 'BcaC01g05521' => 'bca', 'BcaC01g05522' => 'bca', 'BcaC02g07456' => 'bca', 'BcaC02g08946' => 'bca', 'BcaC02g08947' => 'bca', 'BcaC02g12012' => 'bca', 'BcaC03g16003' => 'bca', 'BcaC04g22486' => 'bca', 'BcaC05g28931' => 'bca', 'BcaC08g43564' => 'bca', 'BcaC08g43565' => 'bca', 'BcaC08g47572' => 'bca', 'BcaC08g47573' => 'bca', 'BcaC09g48395' => 'bca', 'BolC1t04984H' => 'bol', 'BolC2t09770H' => 'bol', 'BolC3t14933H' => 'bol', 'BolC3t14934H' => 'bol', 'BolC3t16952H' => 'bol', 'BolC3t17064H' => 'bol', 'BolC4t22482H' => 'bol', 'BolC4t26454H' => 'bol', 'BolC4t28180H' => 'bol', 'BolC5t33803H' => 'bol', 'BolC6t36035H' => 'bol', 'BolC6t36037H' => 'bol', 'BolC6t40436H' => 'bol', 'BolC9t54777H' => 'bol', 'BraA01t03986Z' => 'bra', 'BraA02t07374Z' => 'bra', 'BraA03t11383Z' => 'bra', 'BraA03t13020Z' => 'bra', 'BraA03t13097Z' => 'bra', 'BraA04t18414Z' => 'bra', 'BraA05t19711Z' => 'bra', 'BraA05t22182Z' => 'bra', 'BraA06t23305Z' => 'bra', 'BraA06t23306Z' => 'bra', 'BraA06t23307Z' => 'bra', 'BraA07t32044Z' => 'bra', 'BraA09t37192Z' => 'bra', 'C01p50300' => 'bna', 'C02p37600' => 'bna', 'C03p25410' => 'bna', 'C03p25420' => 'bna', 'C03p46860' => 'bna', 'C03p47870' => 'bna', 'C04p08920' => 'bna', 'C04p66790' => 'bna', 'C05p50580' => 'bna', 'C06p09630' => 'bna', 'C06p09650' => 'bna', 'C06p54230' => 'bna', 'C09p18770' => 'bna', 'CAN.G26.12' => 'can', 'CAN.G407.85' => 'can', 'CAN.G5.37' => 'can', 'CAN.G532.77' => 'can', 'CAN.G792.85' => 'can', 'CAN.G859.15' => 'can', 'CAN.G859.16' => 'can', 'CANSAT21G0411' => 'cansat', 'CANSAT21G0479' => 'cansat', 'CANSAT21G0549' => 'cansat', 'CANSAT21G0640' => 'cansat', 'CANSAT21G0805' => 'cansat', 'CANSAT21G1612' => 'cansat', 'CANSAT35G0119' => 'cansat', 'CANSAT56G0765' => 'cansat', 'CANSAT56G3641' => 'cansat', 'CARHR047940' => 'chi', 'CARHR074380' => 'chi', 'CARHR089190' => 'chi', 'CARHR090900' => 'chi', 'CARHR133310' => 'chi', 'CARHR287640' => 'chi', 'Carub.0001s4315' => 'cru', 'Carub.0002s0147' => 'cru', 'Carub.0002s2740' => 'cru', 'Carub.0003s1395' => 'cru', 'Carub.0003s1555' => 'cru', 'Carub.0004s2062' => 'cru', 'Carub.0007s3388' => 'cru', 'Ca_01057_v3' => 'car', 'Ca_01585_v3' => 'car', 'Ca_10955_v3' => 'car', 'Ca_17546_v3' => 'car', 'Ca_23431_v3' => 'car', 'Cc04_g04360' => 'ccan', 'Cc04_g09060' => 'ccan', 'Cc06_g00050' => 'ccan', 'Cc06_g08220' => 'ccan', 'Cc08_g14440' => 'ccan', 'Cc08_g14450' => 'ccan', 'Cc08_g15340' => 'ccan', 'CDE03G0328' => 'cde', 'CDE04G2714' => 'cde', 'CDE04G3764' => 'cde', 'CDE06G0972' => 'cde', 'CDE06G1558' => 'cde', 'CDE06G1792' => 'cde', 'CDE07G0227' => 'cde', 'CDE07G0565' => 'cde', 'CDE07G0760' => 'cde', 'CDE07G1964' => 'cde', 'Cfa001964' => 'cfa', 'Cfa003404' => 'cfa', 'Cfa012151' => 'cfa', 'Cfa012152' => 'cfa', 'Cfa012254' => 'cfa', 'Cfa016981' => 'cfa', 'Cfa016985' => 'cfa', 'Cfa018964' => 'cfa', 'Ciclev10009475m.g' => 'ccl', 'Ciclev10012655m.g' => 'ccl', 'Ciclev10012659m.g' => 'ccl', 'Ciclev10012703m.g' => 'ccl', 'Ciclev10023367m.g' => 'ccl', 'Ciclev10024046m.g' => 'ccl', 'Ciclev10024192m.g' => 'ccl', 'Ciclev10024234m.g' => 'ccl', 'Ciclev10026490m.g' => 'ccl', 'Ciclev10026945m.g' => 'ccl', 'CiPaw.01G247900' => 'cil', 'CiPaw.03G246800' => 'cil', 'CiPaw.04G173600' => 'cil', 'CiPaw.09G225100' => 'cil', 'CiPaw.11G042200' => 'cil', 'CiPaw.11G137800' => 'cil', 'CiPaw.11G137900' => 'cil', 'CiPaw.12G088600' => 'cil', 'CiPaw.12G094800' => 'cil', 'CiPaw.12G094900' => 'cil', 'ClCG01G002890' => 'cla', 'ClCG01G002900' => 'cla', 'ClCG07G007810' => 'cla', 'ClCG07G012600' => 'cla', 'ClCG09G002930' => 'cla', 'ClCG10G022860' => 'cla', 'COL.COLO4_08347' => 'col', 'COL.COLO4_12963' => 'col', 'COL.COLO4_19957' => 'col', 'COL.COLO4_34434' => 'col', 'COL.COLO4_34435' => 'col', 'COL.COLO4_35121' => 'col', 'Cpa.g.sc10.264' => 'cpa', 'Cpa.g.sc201.7' => 'cpa', 'Cpa.g.sc3081.1' => 'cpa', 'Cpa.g.sc56.96' => 'cpa', 'CsaV3_3G032950' => 'csa', 'CsaV3_4G001610' => 'csa', 'CsaV3_4G006150' => 'csa', 'CsaV3_5G002980' => 'csa', 'CsaV3_5G003000' => 'csa', 'CsaV3_7G032340' => 'csa', 'CSS0001281' => 'camsi', 'CSS0004149' => 'camsi', 'CSS0010093' => 'camsi', 'CSS0015535' => 'camsi', 'CSS0031039' => 'camsi', 'CSS0033774' => 'camsi', 'CSS0035620' => 'camsi', 'CSS0036012' => 'camsi', 'CSS0036852' => 'camsi', 'CSS0037132' => 'camsi', 'CSS0039454' => 'camsi', 'CSS0041621' => 'camsi', 'CSS0042245' => 'camsi', 'CSS0046594' => 'camsi', 'DCAR_000601' => 'dca', 'DCAR_000637' => 'dca', 'DCAR_006746' => 'dca', 'DCAR_008406' => 'dca', 'DCAR_008407' => 'dca', 'DCAR_008408' => 'dca', 'DCAR_009471' => 'dca', 'DCAR_016261' => 'dca', 'DCAR_021342' => 'dca', 'Dinv12554' => 'din', 'Dinv16922' => 'din', 'Dinv25380' => 'din', 'Dinv25386' => 'din', 'Dinv25471' => 'din', 'Dinv30603' => 'din', 'Dinv30604' => 'din', 'Dinv36496' => 'din', 'Dinv38121' => 'din', 'Dinv38894' => 'din', 'Dinv38958' => 'din', 'Dinv38961' => 'din', 'Duzib068G1041' => 'dzi', 'Duzib068G1152' => 'dzi', 'Duzib068G1390' => 'dzi', 'Duzib084G0611' => 'dzi', 'Duzib084G1379' => 'dzi', 'Duzib150G1279' => 'dzi', 'Duzib150G1638' => 'dzi', 'Duzib160G0765' => 'dzi', 'Duzib168G0493' => 'dzi', 'Duzib170G0142' => 'dzi', 'Duzib205G1032' => 'dzi', 'Duzib205G1484' => 'dzi', 'Duzib205G1504' => 'dzi', 'Duzib235G0322' => 'dzi', 'Duzib235G0557' => 'dzi', 'ECA233G1282' => 'eca', 'ECA234G3984' => 'eca', 'ECA236G2116' => 'eca', 'ECA236G2171' => 'eca', 'ECA236G4647' => 'eca', 'ECA240G4778' => 'eca', 'ECA247G1680' => 'eca', 'ECA248G2605' => 'eca', 'EL10Ac5g12778' => 'bvu', 'EL10Ac5g12779' => 'bvu', 'EL10Ac5g12845' => 'bvu', 'EL10Ac7g16486' => 'bvu', 'EL10Ac7g16488' => 'bvu', 'EL10Ac8g18694' => 'bvu', 'EL10Ac9g21905' => 'bvu', 'EL10Ac9g21906' => 'bvu', 'Eucgr.A00877' => 'egr', 'Eucgr.A00880' => 'egr', 'Eucgr.C03188' => 'egr', 'Eucgr.D01869' => 'egr', 'Eucgr.E00784' => 'egr', 'Eucgr.F03873' => 'egr', 'Eucgr.K01316' => 'egr', 'FAN02G2255' => 'fan', 'FAN02G3016' => 'fan', 'FAN02G3277' => 'fan', 'FAN04G1759' => 'fan', 'FAN04G2562' => 'fan', 'FAN04G2814' => 'fan', 'FAN05G0978' => 'fan', 'FAN05G2046' => 'fan', 'FAN08G0439' => 'fan', 'FAN08G1733' => 'fan', 'FAN08G3541' => 'fan', 'FAN09G2216' => 'fan', 'FAN09G3818' => 'fan', 'FAN09G4242' => 'fan', 'FAN13G0260' => 'fan', 'FAN13G0606' => 'fan', 'FAN13G0760' => 'fan', 'FAN13G0818' => 'fan', 'FAN14G1426' => 'fan', 'FAN14G4033' => 'fan', 'FAN14G4803' => 'fan', 'FAN18G1749' => 'fan', 'FAN18G1930' => 'fan', 'FAN18G2521' => 'fan', 'FvH4_5g02020' => 'fve', 'FvH4_5g02030' => 'fve', 'FvH4_5g03300' => 'fve', 'FvH4_6g09120' => 'fve', 'FvH4_6g09160' => 'fve', 'FvH4_6g29760' => 'fve', 'FvH4_6g35760' => 'fve', 'Glyma.01G218200' => 'gma', 'Glyma.01G222600' => 'gma', 'Glyma.05G206200' => 'gma', 'Glyma.05G212300' => 'gma', 'Glyma.07G030300' => 'gma', 'Glyma.07G045500' => 'gma', 'Glyma.08G013100' => 'gma', 'Glyma.08G018800' => 'gma', 'Glyma.08G212600' => 'gma', 'Glyma.11G020800' => 'gma', 'Glyma.11G025000' => 'gma', 'Glyma.13G365700' => 'gma', 'Glyma.15G007500' => 'gma', 'Glyma.16G013400' => 'gma', 'Glyma.16G222200' => 'gma', 'Glyma.20G028350' => 'gma', 'Gohir.A02G104900' => 'ghi', 'Gohir.A05G123500' => 'ghi', 'Gohir.A05G141501' => 'ghi', 'Gohir.A07G036700' => 'ghi', 'Gohir.A07G107900' => 'ghi', 'Gohir.A08G003900' => 'ghi', 'Gohir.A08G113800' => 'ghi', 'Gohir.A08G180500' => 'ghi', 'Gohir.A09G094000' => 'ghi', 'Gohir.A10G073400' => 'ghi', 'Gohir.A11G023200' => 'ghi', 'Gohir.A12G227000' => 'ghi', 'Gohir.D03G078900' => 'ghi', 'Gohir.D05G124500' => 'ghi', 'Gohir.D05G143525' => 'ghi', 'Gohir.D05G143700' => 'ghi', 'Gohir.D07G040900' => 'ghi', 'Gohir.D07G111800' => 'ghi', 'Gohir.D08G014200' => 'ghi', 'Gohir.D08G134300' => 'ghi', 'Gohir.D08G199300' => 'ghi', 'Gohir.D09G093600' => 'ghi', 'Gohir.D10G077700' => 'ghi', 'Gohir.D11G022900' => 'ghi', 'Gohir.D12G229300' => 'ghi', 'Gorai.001G043300' => 'gra', 'Gorai.001G120200' => 'gra', 'Gorai.003G085200' => 'gra', 'Gorai.004G008600' => 'gra', 'Gorai.004G137400' => 'gra', 'Gorai.004G210100' => 'gra', 'Gorai.006G110200' => 'gra', 'Gorai.007G024700' => 'gra', 'Gorai.008G245600' => 'gra', 'Gorai.009G128500' => 'gra', 'Gorai.009G147600' => 'gra', 'Gorai.011G084100' => 'gra', 'GSVIVG01017334001' => 'vvi', 'GSVIVG01019427001' => 'vvi', 'GSVIVG01019780001' => 'vvi', 'GSVIVG01019781001' => 'vvi', 'GSVIVG01022520001' => 'vvi', 'GSVIVG01029832001' => 'vvi', 'GSVIVG01029838001' => 'vvi', 'HanXRQChr01g0000291' => 'han', 'HanXRQChr03g0087291' => 'han', 'HanXRQChr06g0165671' => 'han', 'HanXRQChr06g0165681' => 'han', 'HanXRQChr07g0187821' => 'han', 'HanXRQChr10g0286681' => 'han', 'HanXRQChr10g0302301' => 'han', 'HanXRQChr10g0302311' => 'han', 'HanXRQChr11g0329271' => 'han', 'HanXRQChr11g0349521' => 'han', 'HanXRQChr11g0349731' => 'han', 'HanXRQChr11g0349741' => 'han', 'HanXRQChr11g0349771' => 'han', 'HanXRQChr11g0349781' => 'han', 'HanXRQChr12g0361371' => 'han', 'HanXRQChr12g0361631' => 'han', 'HanXRQChr12g0384521' => 'han', 'HanXRQChr12g0384531' => 'han', 'HanXRQChr13g0394601' => 'han', 'HanXRQChr13g0416201' => 'han', 'HanXRQChr14g0445851' => 'han', 'HanXRQChr15g0464631' => 'han', 'HanXRQChr16g0528121' => 'han', 'HanXRQChr17g0533411' => 'han', 'Haze_00587' => 'cav', 'Haze_00588' => 'cav', 'Haze_07346' => 'cav', 'Haze_08880' => 'cav', 'Haze_08881' => 'cav', 'Haze_16554' => 'cav', 'Haze_16555' => 'cav', 'Haze_21222' => 'cav', 'Haze_21226' => 'cav', 'Haze_25544' => 'cav', 'Hma1.2p1_0042F.1_g025590' => 'hma', 'Hma1.2p1_0174F.1_g076600' => 'hma', 'Hma1.2p1_0377F.1_g139260' => 'hma', 'Hma1.2p1_0377F.1_g139270' => 'hma', 'Hma1.2p1_1144F.1_g261260' => 'hma', 'HPP92_006685' => 'vpl', 'HPP92_007569' => 'vpl', 'HPP92_018077' => 'vpl', 'HPP92_018078' => 'vpl', 'HPP92_018256' => 'vpl', 'HPP92_019039' => 'vpl', 'HPP92_019040' => 'vpl', 'HPP92_022877' => 'vpl', 'HPP92_022879' => 'vpl', 'HPP92_022892' => 'vpl', 'HPP92_023161' => 'vpl', 'Hund00520' => 'sun', 'Hund03681' => 'sun', 'Hund14260' => 'sun', 'Hund18643' => 'sun', 'Hund30259' => 'sun', 'Hund30671' => 'sun', 'Lalb_Chr04g0261211' => 'lal', 'Lalb_Chr05g0224441' => 'lal', 'Lalb_Chr05g0224891' => 'lal', 'Lalb_Chr09g0320771' => 'lal', 'Lalb_Chr09g0333321' => 'lal', 'Lalb_Chr10g0101131' => 'lal', 'Lalb_Chr16g0377151' => 'lal', 'Lalb_Chr16g0389881' => 'lal', 'Lalb_Chr22g0350851' => 'lal', 'Lalb_Chr24g0395491' => 'lal', 'Lalb_Chr25g0279301' => 'lal', 'Lj2A177T47' => 'lonja', 'Lj2A188G43' => 'lonja', 'Lj2A53T33' => 'lonja', 'Lj2C188G10' => 'lonja', 'Lj2C188T9' => 'lonja', 'Lj2C54T8' => 'lonja', 'Lj3g0000559' => 'lja', 'Lj3g0001671' => 'lja', 'Lj3g0016592' => 'lja', 'Lj3g0022184' => 'lja', 'Lj4g0025214' => 'lja', 'Lj4g0026340' => 'lja', 'Lj5A72T19' => 'lonja', 'Lj8A232T66' => 'lonja', 'Lj9A500T80' => 'lonja', 'LjContig00312_ERROPOS870357g0002154' => 'lja', 'Lsat_1_v5_gn_3_7761' => 'lsa', 'Lsat_1_v5_gn_5_131840' => 'lsa', 'Lsat_1_v5_gn_5_153560' => 'lsa', 'Lsat_1_v5_gn_5_175881' => 'lsa', 'Lsat_1_v5_gn_6_24840' => 'lsa', 'Lsat_1_v5_gn_6_32681' => 'lsa', 'Lsat_1_v5_gn_6_6861' => 'lsa', 'Lsat_1_v5_gn_6_87040' => 'lsa', 'Lsat_1_v5_gn_7_37840' => 'lsa', 'Lsat_1_v5_gn_8_10700' => 'lsa', 'Lsat_1_v5_gn_8_108320' => 'lsa', 'Lsat_1_v5_gn_9_40181' => 'lsa', 'Manes.01G063400' => 'mes', 'Manes.01G063500' => 'mes', 'Manes.02G016300' => 'mes', 'Manes.02G023600' => 'mes', 'Manes.02G023800' => 'mes', 'Manes.04G112900' => 'mes', 'Manes.04G150400' => 'mes', 'Manes.08G166200' => 'mes', 'Manes.08G166600' => 'mes', 'Manes.09G119800' => 'mes', 'Manes.09G119900' => 'mes', 'Manes.11G056500' => 'mes', 'Manes.14G134200' => 'mes', 'MBI01_g20900_MAGBIO' => 'mbi', 'MBI01_g26499_MAGBIO' => 'mbi', 'MBI03_g31634_MAGBIO' => 'mbi', 'MBI03_g39806_MAGBIO' => 'mbi', 'MBI03_g44225_MAGBIO' => 'mbi', 'MBI03_g44438_MAGBIO' => 'mbi', 'MBI03_g45386_MAGBIO' => 'mbi', 'MBI04_g29335_MAGBIO' => 'mbi', 'MBI06_g08451_MAGBIO' => 'mbi', 'MBI06_g08452_MAGBIO' => 'mbi', 'MBI07_g11732_MAGBIO' => 'mbi', 'MBI15_g05580_MAGBIO' => 'mbi', 'MBI15_g37411_MAGBIO' => 'mbi', 'MBI15_g37413_MAGBIO' => 'mbi', 'MBI15_g47099_MAGBIO' => 'mbi', 'MBI15_g47101_MAGBIO' => 'mbi', 'MBI18_g20046_MAGBIO' => 'mbi', 'MBI19_g32867_MAGBIO' => 'mbi', 'MD04G1180200' => 'mdo', 'MD04G1180600' => 'mdo', 'MD04G1180700' => 'mdo', 'MD06G1078800' => 'mdo', 'MD06G1080200' => 'mdo', 'MD06G1080400' => 'mdo', 'MD06G1080500' => 'mdo', 'MD06G1080600' => 'mdo', 'MD06G1092800' => 'mdo', 'MD12G1195400' => 'mdo', 'MD12G1196000' => 'mdo', 'MD14G1099500' => 'mdo', 'MD14G1099700' => 'mdo', 'MD14G1101500' => 'mdo', 'MD14G1101600' => 'mdo', 'MD14G1113300' => 'mdo', 'MD17G1153800' => 'mdo', 'MD17G1211400' => 'mdo', 'Medtr0415s0060' => 'mtr', 'Medtr0559s0010' => 'mtr', 'Medtr0559s0020' => 'mtr', 'Medtr2g103840' => 'mtr', 'Medtr2g103850' => 'mtr', 'Medtr4g010180' => 'mtr', 'Medtr8g023060' => 'mtr', 'Medtr8g097370' => 'mtr', 'Medtr8g097380' => 'mtr', 'Medtr8g097390' => 'mtr', 'Medtr8g097400' => 'mtr', 'Medtr8g097410' => 'mtr', 'Medtr8g099000' => 'mtr', 'MELO3C005656.2' => 'cme', 'MELO3C005657.2' => 'cme', 'MELO3C009092.2' => 'cme', 'MELO3C016334.2' => 'cme', 'MELO3C017878.2' => 'cme', 'MELO3C023425.2' => 'cme', 'Migut.A00714' => 'egut', 'Migut.A00786' => 'egut', 'Migut.D00914' => 'egut', 'Migut.E01106' => 'egut', 'Migut.E01107' => 'egut', 'Migut.E01212' => 'egut', 'Migut.F01886' => 'egut', 'Migut.I00767' => 'egut', 'MSTRG.11139' => 'ama', 'MSTRG.11951' => 'ama', 'MSTRG.11996' => 'ama', 'MSTRG.22745' => 'ama', 'MSTRG.25592' => 'ama', 'MSTRG.319' => 'ama', 'MSTRG.8221' => 'ama', 'Nitab4.5_0000028g0140' => 'nta', 'Nitab4.5_0000347g0150' => 'nta', 'Nitab4.5_0000360g0110' => 'nta', 'Nitab4.5_0000360g0120' => 'nta', 'Nitab4.5_0000966g0090' => 'nta', 'Nitab4.5_0001200g0180' => 'nta', 'Nitab4.5_0001200g0200' => 'nta', 'Nitab4.5_0001356g0070' => 'nta', 'Nitab4.5_0001356g0100' => 'nta', 'Nitab4.5_0001356g0110' => 'nta', 'Nitab4.5_0001807g0080' => 'nta', 'Nitab4.5_0001999g0030' => 'nta', 'Nitab4.5_0002259g0060' => 'nta', 'Nitab4.5_0002785g0010' => 'nta', 'Nitab4.5_0003283g0040' => 'nta', 'Nitab4.5_0003463g0120' => 'nta', 'Nitab4.5_0003632g0020' => 'nta', 'Nitab4.5_0003722g0040' => 'nta', 'Nitab4.5_0003907g0010' => 'nta', 'Nitab4.5_0004032g0010' => 'nta', 'Nitab4.5_0004836g0060' => 'nta', 'Nitab4.5_0005540g0020' => 'nta', 'Nitab4.5_0009051g0020' => 'nta', 'Nitab4.5_0010838g0010' => 'nta', 'Nitab4.5_0011908g0010' => 'nta', 'Nitab4.5_0011908g0020' => 'nta', 'Nitab4.5_0015173g0010' => 'nta', 'Nn1g00550' => 'nnu', 'Nn1g01465' => 'nnu', 'Nn1g01699' => 'nnu', 'Nn1g05973' => 'nnu', 'Nn2g10245' => 'nnu', 'Nn2g11242' => 'nnu', 'Nn2g11486' => 'nnu', 'Nn2g12075' => 'nnu', 'Nn3g19266' => 'nnu', 'Nn3g20270' => 'nnu', 'Nn3g21511' => 'nnu', 'Nn4g25783' => 'nnu', 'Nn5g26741' => 'nnu', 'Nn5g26745' => 'nnu', 'Nn6g33498' => 'nnu', 'Nn8g39495' => 'nnu', 'Nn8g41059' => 'nnu', 'Oeu009180.1' => 'oeu', 'Oeu013182.1' => 'oeu', 'Oeu019822.1' => 'oeu', 'Oeu019823.1' => 'oeu', 'Oeu026916.1' => 'oeu', 'Oeu027809.1' => 'oeu', 'Oeu029711.2' => 'oeu', 'Oeu033456.1' => 'oeu', 'Oeu036029.1' => 'oeu', 'Oeu041089.1' => 'oeu', 'Oeu048800.1' => 'oeu', 'Oeu059016.1' => 'oeu', 'Oeu063833.1' => 'oeu', 'Oeu063839.1' => 'oeu', 'Os01g0771000' => 'osa', 'Os01g0817650' => 'osa', 'Os01g0931600' => 'osa', 'Os01g0931700' => 'osa', 'Os05g0311500' => 'osa', 'Os05g0484800' => 'osa', 'Os05g0510100' => 'osa', 'Os07g0672600' => 'osa', 'Os11g0120300' => 'osa', 'Os11g0121000' => 'osa', 'Os12g0120100' => 'osa', 'Os12g0120500' => 'osa', 'Peaxi162Scf00074g01621' => 'pax', 'Peaxi162Scf00074g01622' => 'pax', 'Peaxi162Scf00102g01537' => 'pax', 'Peaxi162Scf00102g01553' => 'pax', 'Peaxi162Scf00102g01554' => 'pax', 'Peaxi162Scf00119g00313' => 'pax', 'Peaxi162Scf00227g00008' => 'pax', 'Peaxi162Scf00323g00931' => 'pax', 'Peaxi162Scf00332g00071' => 'pax', 'Peaxi162Scf00332g00622' => 'pax', 'Peaxi162Scf00365g00930' => 'pax', 'Peaxi162Scf00714g00012' => 'pax', 'Peaxi162Scf00714g00013' => 'pax', 'Peaxi162Scf00891g00123' => 'pax', 'PGR004G1921' => 'pgr', 'PGR031G1565' => 'pgr', 'PGR031G3617' => 'pgr', 'PGR031G3772' => 'pgr', 'PGR042G1147' => 'pgr', 'PGR102G0899' => 'pgr', 'PGR102G1276' => 'pgr', 'PGSC0003DMG400000637' => 'stu', 'PGSC0003DMG400003046' => 'stu', 'PGSC0003DMG400004266' => 'stu', 'PGSC0003DMG400005002' => 'stu', 'PGSC0003DMG400005818' => 'stu', 'PGSC0003DMG400011797' => 'stu', 'PGSC0003DMG400012176' => 'stu', 'PGSC0003DMG400012177' => 'stu', 'PGSC0003DMG400033552' => 'stu', 'PGSC0003DMG401012350' => 'stu', 'PGSC0003DMG402012350' => 'stu', 'Phvul.002G156100' => 'pvu', 'Phvul.002G160600' => 'pvu', 'Phvul.002G287800' => 'pvu', 'Phvul.002G293600' => 'pvu', 'Phvul.005G178100' => 'pvu', 'Phvul.010G060200' => 'pvu', 'Phvul.010G123600' => 'pvu', 'Phvul.010G156000' => 'pvu', 'Potri.001G098400' => 'ptr', 'Potri.001G106300' => 'ptr', 'Potri.001G106400' => 'ptr', 'Potri.001G192000' => 'ptr', 'Potri.003G032500' => 'ptr', 'Potri.003G072200' => 'ptr', 'Potri.003G125200' => 'ptr', 'Potri.003G125300' => 'ptr', 'Potri.003G133200' => 'ptr', 'Potri.006G067000' => 'ptr', 'Potri.006G113400' => 'ptr', 'Potri.006G113800' => 'ptr', 'Potri.016G143000' => 'ptr', 'Potri.016G143500' => 'ptr', 'Prupe.3G086900' => 'ppe', 'Prupe.3G087000' => 'ppe', 'Prupe.5G096400' => 'ppe', 'Prupe.5G096500' => 'ppe', 'Prupe.5G096600' => 'ppe', 'Prupe.5G096700' => 'ppe', 'Prupe.5G096800' => 'ppe', 'Prupe.5G107300' => 'ppe', 'Prupe.6G300100' => 'ppe', 'Prupe.6G300500' => 'ppe', 'Psat4g165680' => 'psa', 'Psat5g302000' => 'psa', 'Psat7g029360' => 'psa', 'Psat7g034640' => 'psa', 'Psat7g034720' => 'psa', 'Psat7g034760' => 'psa', 'Psat7g034840' => 'psa', 'Psat7g034880' => 'psa', 'Psat7g035160' => 'psa', 'Psat7g035280' => 'psa', 'Psat7g035320' => 'psa', 'Psat7g256480' => 'psa', 'Psat7g256520' => 'psa', 'PSO017G1750' => 'pso', 'PSO135G0722' => 'pso', 'PSO135G0990' => 'pso', 'PSO135G1016' => 'pso', 'PSO170G0974' => 'pso', 'PSO170G1985' => 'pso', 'PSO339G0171' => 'pso', 'PSO339G0872' => 'pso', 'PSO339G1630' => 'pso', 'PSO339G2405' => 'pso', 'PSO339G4303' => 'pso', 'PSO339G4675' => 'pso', 'PSO339G6383' => 'pso', 'PSO384G0359' => 'pso', 'PSO384G0925' => 'pso', 'PSO384G1125' => 'pso', 'PSO384G2030' => 'pso', 'PSO384G2094' => 'pso', 'PSO384G2999' => 'pso', 'PSO384G4671' => 'pso', 'PSO724G0273' => 'pso', 'PSO724G0786' => 'pso', 'PSO724G0876' => 'pso', 'QL02p033231' => 'qlo', 'QL02p089479' => 'qlo', 'QL05p029709' => 'qlo', 'QL07p030306' => 'qlo', 'QL07p030412' => 'qlo', 'QL07p030699' => 'qlo', 'QL07p030764' => 'qlo', 'QL10p016407' => 'qlo', 'QL12p018175' => 'qlo', 'QL12p018212' => 'qlo', 'QL12p018227' => 'qlo', 'RcHm_v2.0_Chr2g0135471' => 'rch', 'RcHm_v2.0_Chr2g0147771' => 'rch', 'RcHm_v2.0_Chr3g0459331' => 'rch', 'RcHm_v2.0_Chr3g0459371' => 'rch', 'RcHm_v2.0_Chr7g0196481' => 'rch', 'RcHm_v2.0_Chr7g0198311' => 'rch', 'RcHm_v2.0_Chr7g0198321' => 'rch', 'RcHm_v2.0_Chr7g0198341' => 'rch', 'Rhsim02G0226100' => 'rsi', 'Rhsim02G0236200' => 'rsi', 'Rhsim04G0119700' => 'rsi', 'Rhsim04G0119900' => 'rsi', 'Rhsim08G0213200' => 'rsi', 'Sabra01G0073700' => 'sbr', 'Sabra01G0149800' => 'sbr', 'Sabra03G0018700' => 'sbr', 'Sabra03G0043000' => 'sbr', 'Sabra03G0088600' => 'sbr', 'Sabra03G0088700' => 'sbr', 'Sabra03G0095500' => 'sbr', 'Sabra04G0159000' => 'sbr', 'Sabra04G0159400' => 'sbr', 'Sabra06G0088300' => 'sbr', 'Sabra06G0088700' => 'sbr', 'SalBow1G1098' => 'sbo', 'SalBow1G4352' => 'sbo', 'SalBow2G3315' => 'sbo', 'SalBow6G2234' => 'sbo', 'SalBow6G2322' => 'sbo', 'SalBow6G4455' => 'sbo', 'SalBow6G4939' => 'sbo', 'SalBow7G0200' => 'sbo', 'SalBow8G2723' => 'sbo', 'Sc07g0009880' => 'sci', 'Sc10g0005910' => 'sci', 'Sc12g0010910' => 'sci', 'Sc20g0007400' => 'sci', 'Sc20g0007480' => 'sci', 'Sed0000962' => 'sed', 'Sed0001435' => 'sed', 'Sed0002792' => 'sed', 'Sed0004478' => 'sed', 'Sed0008027' => 'sed', 'Sed0010513' => 'sed', 'Sed0011775' => 'sed', 'Sed0011911' => 'sed', 'Sed0013943' => 'sed', 'Sed0016635' => 'sed', 'Sed0018628' => 'sed', 'SEGI_01375' => 'sgi', 'SEGI_01933' => 'sgi', 'SEGI_04245' => 'sgi', 'SEGI_08381' => 'sgi', 'SEGI_09235' => 'sgi', 'SEGI_09756' => 'sgi', 'SEGI_11082' => 'sgi', 'SEGI_12087' => 'sgi', 'SEGI_13351' => 'sgi', 'SEGI_13388' => 'sgi', 'SEGI_13609' => 'sgi', 'SEGI_15211' => 'sgi', 'SEGI_16389' => 'sgi', 'SEGI_17403' => 'sgi', 'SEGI_17878' => 'sgi', 'SEGI_20022' => 'sgi', 'SEGI_20831' => 'sgi', 'SEGI_23494' => 'sgi', 'SEGI_23860' => 'sgi', 'SEGI_24310' => 'sgi', 'SEGI_30587' => 'sgi', 'SEGI_30653' => 'sgi', 'SEGI_31208' => 'sgi', 'SEGI_32232' => 'sgi', 'SEGI_32797' => 'sgi', 'SEGI_34428' => 'sgi', 'SEGI_37696' => 'sgi', 'SEGI_38428' => 'sgi', 'SEGI_39842' => 'sgi', 'SEGI_41504' => 'sgi', 'SGA_v2.0_scaffold111G31466' => 'sas', 'SGA_v2.0_scaffold1719G54020' => 'sas', 'SGA_v2.0_scaffold253G45120' => 'sas', 'SGA_v2.0_scaffold25G10711' => 'sas', 'SGA_v2.0_scaffold340G49290' => 'sas', 'SGA_v2.0_scaffold37G14768' => 'sas', 'SGA_v2.0_scaffold385G50468' => 'sas', 'SGA_v2.0_scaffold58G20309' => 'sas', 'SGA_v2.0_scaffold5G02693' => 'sas', 'Solyc03g116710.3' => 'sly', 'Solyc08g007980.3' => 'sly', 'Solyc08g080750.4' => 'sly', 'Solyc08g080760.2' => 'sly', 'Solyc08g080770.3' => 'sly', 'Solyc08g081680.2' => 'sly', 'Solyc09g005210.4' => 'sly', 'Solyc12g056305.1' => 'sly', 'Solyc12g056310.2' => 'sly', 'Sopen03g035620' => 'spe', 'Sopen08g029070' => 'spe', 'Sopen08g029080' => 'spe', 'Sopen08g029090' => 'spe', 'Sopen08g029970' => 'spe', 'Sopen09g001190' => 'spe', 'Sopen12g028860' => 'spe', 'Sopen12g028870' => 'spe', 'Sp1g40360' => 'spa', 'Sp2g01200' => 'spa', 'Sp3g12550' => 'spa', 'Sp3g14130' => 'spa', 'Sp4g20980' => 'spa', 'Sp5g35680' => 'spa', 'Sp6g41220' => 'spa', 'Sp7g00450' => 'spa', 'TAR259G0001' => 'tar', 'TAR362G0705' => 'tar', 'TAR367G0007' => 'tar', 'TAR367G0008' => 'tar', 'TAR369G0576' => 'tar', 'TAR375G0545' => 'tar', 'TAR383G0777' => 'tar', 'TAR625G0811' => 'tar', 'TAR625G1078' => 'tar', 'TAR633G0079' => 'tar', 'TAR633G2400' => 'tar', 'TAR636G0630' => 'tar', 'THA.LOC104809398' => 'tha', 'THA.LOC104810507' => 'tha', 'THA.LOC104812506' => 'tha', 'THA.LOC104813564' => 'tha', 'THA.LOC104815528' => 'tha', 'THA.LOC104822617' => 'tha', 'THA.LOC104823338' => 'tha', 'THA.LOC104823344' => 'tha', 'THA.LOC104823602' => 'tha', 'Thecc.03G276000' => 'tca', 'Thecc.03G276100' => 'tca', 'Thecc.03G287300' => 'tca', 'Thecc.06G022900' => 'tca', 'Thecc.06G129500' => 'tca', 'Thecc.09G129700' => 'tca', 'Thecc.09G289900' => 'tca', 'Thhalv10014772m.g' => 'esa', 'Thhalv10017266m.g' => 'esa', 'Thhalv10019134m.g' => 'esa', 'Thhalv10021485m.g' => 'esa', 'Thhalv10022232m.g' => 'esa', 'Thhalv10023707m.g' => 'esa', 'Thhalv10027919m.g' => 'esa', 'TPR.G12813' => 'tpr', 'TPR.G12849' => 'tpr', 'TPR.G12952' => 'tpr', 'TPR.G12975' => 'tpr', 'TPR.G37146' => 'tpr', 'TPR.G37150' => 'tpr', 'TPR.G38601' => 'tpr', 'TPR.G39283' => 'tpr', 'TWI12G0749' => 'twi', 'TWI14G0341' => 'twi', 'TWI34G0923' => 'twi', 'TWI53G0763' => 'twi', 'TWI60G1700' => 'twi', 'TWI74G1057' => 'twi', 'TWI75G1020' => 'twi', 'TWI77G0244' => 'twi', 'TWI77G0876' => 'twi', 'TWI81G0428' => 'twi', 'unitig_0.g348' => 'ugi', 'unitig_62.g23823' => 'ugi', 'unitig_90.g27542' => 'ugi', 'vmacro08960' => 'vma', 'vmacro08962' => 'vma', 'vmacro11309' => 'vma', 'vmacro11413' => 'vma', 'vmacro13980' => 'vma', 'vmacro18994' => 'vma', 'VMungo0251G2397' => 'vmu', 'VMungo0251G3411' => 'vmu', 'VMungo0331G0403' => 'vmu', 'VMungo0331G1485' => 'vmu', 'VMungo0464G1028' => 'vmu', 'VMungo1080G1539' => 'vmu', 'VMungo1215G0666' => 'vmu', 'VMungo1215G1837' => 'vmu', 'Zm00001eb016550' => 'zma', 'Zm00001eb093780' => 'zma', 'Zm00001eb142330' => 'zma', 'Zm00001eb142340' => 'zma', 'Zm00001eb149740' => 'zma', 'Zm00001eb151950' => 'zma', 'Zm00001eb162050' => 'zma', 'Zm00001eb163760' => 'zma', 'Zm00001eb163780' => 'zma', 'Zm00001eb195550' => 'zma', 'Zm00001eb195560' => 'zma', 'Zm00001eb195570' => 'zma', 'Zm00001eb290990' => 'zma', 'Zm00001eb292430' => 'zma', 'Zm00001eb352140' => 'zma', 'Zm00001eb363550' => 'zma', 'Zm00001eb363560' => 'zma', 'Zm00001eb363570' => 'zma', 'Zm00001eb369000' => 'zma', 'Zm00001eb405720' => 'zma' ) $gf_id = 'HOM05D000551' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000551' ) $data_identifier = 'HOM05D000551' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 12, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 5, 'arhy' => (int) 14, 'ath' => (int) 9, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 12, 'bca' => (int) 29, 'bol' => (int) 14, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 7, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 10, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 6, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 12, 'dzi' => (int) 15, 'eca' => (int) 8, 'bvu' => (int) 8, 'egr' => (int) 7, 'fan' => (int) 24, 'fve' => (int) 7, 'gma' => (int) 16, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 24, 'cav' => (int) 10, 'hma' => (int) 5, 'vpl' => (int) 11, 'sun' => (int) 6, 'lal' => (int) 11, 'lonja' => (int) 9, 'lja' => (int) 7, 'lsa' => (int) 12, 'mes' => (int) 13, 'mbi' => (int) 18, 'mdo' => (int) 18, 'mtr' => (int) 13, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 17, 'oeu' => (int) 14, 'osa' => (int) 12, 'pax' => (int) 14, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 8, 'ptr' => (int) 14, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 23, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 5, 'sbr' => (int) 11, 'sbo' => (int) 9, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 30, 'sas' => (int) 9, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 12, 'tha' => (int) 9, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 3, 'vma' => (int) 6, 'vmu' => (int) 8, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb405720' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1